Xiaoran Zhou

Data Science Researcher

Bioinformatics, IBG-4
Forschungszentrum Jülich

Specializing in AI Applications & Research Data Management

AI Portfolio LinkedIn GitHub

Publications

Selected publications showcasing research in plant sciences, AI-powered data management, and computational modeling.

AI-Powered Tools

Innovative applications leveraging LLMs for research data management

DataPLAN

LLM-Powered Data Management Plan Generator for Plant Sciences

DataPLAN leverages large language models to automatically generate comprehensive, compliant data management plans. The tool integrates LLM workflows to understand research contexts, suggest appropriate metadata standards, and create structured DMPs that meet funder requirements.

LLM Integration Workflow Automation ISA Framework Research Data Management
Read Publication GitHub Repository

elab2arc

AI-Driven Conversion of Experimental Protocols to Standardized Formats

elab2arc uses advanced natural language processing and LLMs to automatically parse free-text experimental protocols from electronic lab notebooks and convert them into standardized, machine-readable Excel files compliant with ARC (Annotated Research Context) specifications.

NLP LLM Parsing ARC Specification Data Standardization
GitHub Repository

DataPLAN MCP Server

Model Context Protocol Server for Research Data Management

A custom-built MCP (Model Context Protocol) server that enables AI assistants like Claude to directly interact with DataPLAN functionality. This server provides structured access to data management planning capabilities, allowing seamless integration of DMP generation into AI-powered research workflows.

Model Context Protocol Server Development API Integration Claude AI
MCP Server Repository Learn About MCP

AI Evaluation Expertise

Leveraging AI for comprehensive quality assessment and optimization

Project Evaluation

AI-powered assessment of research projects, analyzing methodology, data quality, and reproducibility using LLM-based evaluation frameworks.

Code Review

Automated code quality analysis, documentation assessment, and best practice recommendations using AI-assisted review systems.

DMP Analysis

Comprehensive evaluation of Data Management Plans for compliance, completeness, and best practices using LLM validation workflows.

Data Quality Assessment

AI-driven data quality checks, metadata validation, and standardization recommendations for research data.

Technical Skills

Expertise spanning AI, data management, and scientific computing

AI & Machine Learning

Large Language Models (GPT, Claude) Natural Language Processing LLM Workflow Integration Prompt Engineering AI-Assisted Evaluation

Integration & Protocols

Model Context Protocol (MCP) API Development Workflow Automation Server Development Claude AI Integration

Research Data Management

ISA Framework ARC Specification Data Management Plans Metadata Standards FAIR Principles Data Standardization

Development & Tools

Python JavaScript WebAssembly Git/GitHub Bootstrap RESTful APIs

Open Source Contributions

Explore my repositories and contribute to research data tools

DataPLAN

Web-based data management plan generator for plant sciences with LLM integration

View Repository
elab2arc

AI-powered converter from electronic lab notebook protocols to ARC format

View Repository
dataplan-mcp

Model Context Protocol server for integrating DataPLAN with AI assistants

View Repository
View All Repositories

Let's Collaborate

Interested in AI-powered research data management? Let's connect!

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Xiaoran Zhou

Xiaoran's Digital Twin

AI Research Assistant

Xiaoran Zhou
Hello! I'm Xiaoran's AI digital twin. I can help you learn about his research in AI applications, data management, and plant sciences. How can I assist you today?
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📊 DataPLAN
🔬 elab2arc
🌿 Research
📚 Publications